The aim of this study was to characterize the different biochemical and microbiological changes and the effect of the cassava variety during the fermentation of traditional cassava starter. Two cassava varieties, (IAC) and (Bonoua) were investigated at different fermentation times. The load of microorganisms (lactic acid bacteria, coliforms, yeast and mould, aerobic mesophilic, Bacillus) and biochemical parameters (pH, titratable acidity, total and reducing sugar) were assessed. During fermentation, progressive acidification was observed in the pulp of both cassava varieties (0.02-0.12%). The sugar consumption was observed during cassava fermentation (2.4-1.1 mg/g). Rapid growth of coliforms (total and thermotolerant) was obtained between 0 and 48 hours followed by a decrease after 48 hours. The fermentative microflora (lactic acid bacteria, yeast and mould, Bacillus) growth was recorded up to 72 hours before a drop. Contrary to the cassava variety, fermentation time has a significant influence on the evolution of biochemical and microbiological parameters.